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Dr. Anika Groß

Anika Groß

  • Since 01/2008: Researcher at the Department of Databases, University of Leipzig
  • 10/2012 - 12/2013: E-Systems cluster project (HTWK Leipzig) “Portal-basiertes Management von Ontologien und ihrer Evolution”
  • 11/2007 - 12/2007: Research assistant at Institute for Medical Immunology, MLU Halle-Wittenberg

  • Graduation: Dr. rer. nat., Universität Leipzig, March 2014
  • Diploma in Bioinformatics, MLU Halle-Wittenberg, July 2007

Contact

  • +49 341 97 32-240
  • gross [at] informatik.uni-leipzig.de
  • Augustusplatz 10, Paulinum, Room P419

Research

Dissertation

  • “Evolution von ontologiebasierten Mappings in den Lebenswissenschaften” (“Evolution of ontology-based mappings in the life sciences”)
  • Submitted in December 2014
  • Defense March 2014

Talks

Reviewer

External Reviewer

Teaching

Lectures

Exercises & Practical Courses

Seminars

Supervision of Theses

  • BA Oliver Swoboda: Building a COnto-Diff-Plugin for Protégé
  • MA Sebastian Bulka: Evaluating OLAP systems to Analyze Epidemiologic Data in the LIFE Project
  • MA Victor Christen: Reasoning of Ontology Mappings in the Life Sciences
  • MA Anastasiya Chyhir: Evaluating blocking methods for efficient matching of large-scale ontologies in the life sciences
  • MA Toni Fröschke: Development of an infrastructure for web-based ontology versioning
  • MA Michael Gassner: Evolution of Ontology Mappings in the Life sciences
  • BA Richard Uhlich: Building teaching examples for non-computer scientists in database seminars
  • BA Victor Christen: Online visualization of ontology regions
  • BA Anastasiya Chyhir: Analysis of mapping evolution for selected match problems in the life sciences
  • BA Michael Gassner: Analysis of research trends in PubMed using MeSH categories
  • DA Henning Kropp: Computation of diff-evolution-mappings for product catalogs
  • DA Yiming Huang: Stability analysis of ontologies and mappings in GOMMA

Publications

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Lee, L. H.; Groß, A.; Hartung, M.; Liou, D. M.; Rahm, E.
A Multi-Part Matching Strategy for Mapping LOINC with Laboratory Terminologies
Journal of the American Medical Informatics Association (JAMIA)
2014-09
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Christen, V.; Groß, A.; Hartung, M.
REX - a tool for discovering evolution trends in ontology regions
Proc. 10th Intl. Conference on Data Integration in the Life Sciences (DILS), Lisbon, July 2014
2014-07
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Groß, A.
Evolution von ontologiebasierten Mappings in den Lebenswissenschaften
Dissertation, Universität Leipzig
2014-03
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Groß, A.; Dos Reis, J.C.; Hartung, M.; Pruski, C.; Rahm, E.
Semi-Automatic Adaptation of Mappings between Life Science Ontologies
Proc. 9th Intl. Conference on Data Integration in the Life Sciences (DILS), Montreal, July 2013
2013-07
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Hartung, M.; Kolb, L.; Groß, A.; Rahm, E.
Optimizing Similarity Computations for Ontology Matching - Experiences from GOMMA
Proc. 9th Intl. Conference on Data Integration in the Life Sciences (DILS), 2013
2013-07
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Hartung, M.; Groß, A.; Rahm, E.
Composition Methods for Link Discovery
Proc. of 15. GI-Fachtagung für Datenbanksysteme in Business, Technologie und Web (BTW), 2013
2013-03
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Hartung, M.; Groß, A.; Rahm, E.
COnto-Diff : Generation of Complex Evolution Mappings for Life Science Ontologies
Journal of Biomedical Informatics 46 (1): 15-32
2013-02-01
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Groß, A.; Hartung, M.; Kirsten, T.; Rahm, E.
GOMMA Results for OAEI 2012
Seventh International Workshop on Ontology Matching @ ISWC 2012
2012-11
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Groß, A.; Hartung, M.; Thor, A.; Rahm, E.
How do computed ontology mappings evolve? - A case study for life science ontologies
Joint Workshop on Knowledge Evolution and Ontology Dynamics @ ISWC 2012
2012-11

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Groß, A.; Hartung, M.; Prüfer, K.; Kelso, J.; Rahm, E.
Impact of Ontology Evolution on Functional Analyses
Bioinformatics 28 (20): 2671-2677
2012-10-10
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Hartung, M.; Groß, A.; Kirsten, T.; Rahm, E.
E ffective Composition of Mappings for Matching Biomedical Ontologies
To appear in ESWC 2012 Workshops, Revised Selected Papers (LNCS)
2012-09
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publication iconGroß, A.; Hartung, M.; Thor, A.; Rahm, E.
How do Ontology Mappings Change in the Life Sciences?
Selected Poster @ Intl. Conference on Data Integration in the Life Sciences (DILS)
2012-06
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publication iconHartung, M.; Groß, A.; Rahm, E.
Determining and Analyzing Semantic Ontology Changes with CODEX
Demo @ Intl. Conference on Data Integration in the Life Sciences (DILS)
2012-06
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Hartung, M.; Groß, A.; Kirsten, T.; Rahm, E.
E ffective Mapping Composition for Biomedical Ontologies
Semantic Interoperability in Medical Informatics @ ESWC 2012
2012-05
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Groß, A.; Hartung, M.; Thor, A.; Rahm, E.
How do Ontology Mappings Change in the Life Sciences?
CoRR abs/1204.2731
2012-04
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Hartung, M.; Groß, A.; Rahm, E.
CODEX: Exploration of semantic changes between ontology versions
Bioinformatics 28 (6): 895-896
2012-03
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Kirsten, T.; Groß, A.; Hartung, M.; Rahm, E.
GOMMA: A Component-based Infrastructure for managing and analyzing Life Science Ontologies and their Evolution
Journal of Biomedical Semantics 2011, 2:6
2011-11
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Groß, A.; Hartung, M.; Kirsten, T.; Rahm, E.
Mapping Composition for Matching Large Life Science Ontologies
2nd International Conference on Biomedical Ontology (ICBO 2011)
2011-07
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Hartung, M.; Groß, A.; Rahm, E.
Rule-based Generation of Diff Evolution Mappings between Ontology Versions
CoRR abs/1010.0122
2010-10
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Kirsten, T.; Kolb, L.; Hartung, M.; Groß, A.; Köpcke, H.; Rahm, E.
Data Partitioning for Parallel Entity Matching
Proc. 8th Intl. Workshop on Quality in Databases (QDB), 2010
2010-09
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Groß, A.; Hartung, M.; Kirsten, T.; Rahm, E.
On Matching Large Life Science Ontologies in Parallel
7th International Conference on Data Integration in the Life Sciences (DILS 2010)
2010-08
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Hartung, M.; Groß, A.; Kirsten, T.; Rahm, E.
Discovering Evolving Regions in Life Science Ontologies
7th International Conference on Data Integration in the Life Sciences (DILS 2010)
2010-08
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Kirsten, T.; Hartung, M.; Groß, A.; Rahm, E.
Efficient Management of Biomedical Ontology Versions
LNCS 5872, pp.574-583, 4th Intl. Workshop on Ontology Content (Part of the OTM Conferences & Workshops)
2009-11
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Hartung, M.; Kirsten, T.; Groß, A.; Rahm, E.
OnEX: Exploring changes in life science ontologies
BMC Bioinformatics 2009, 10:250
2009-08
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Groß, A.; Hartung, M.; Kirsten, T.; Rahm, E.
Estimating the Quality of Ontology-based Annotations by Considering Evolutionary Changes
Proc. 6th Data Integration in the Life Sciences (DILS) Conf., Springer LNCS 5647, 2009
2009-07
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Hartung, M.; Kirsten, T.; Groß, A.; Rahm, E.
Exploring changes in life science ontologies with OnEX
Poster at 7th Leipzig Research Festival for Life Sciences 2008 and 6th Intl. Workshop on Data Integration in the Life Sciences (DILS) 2009
2009-07
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Thor, A.; Hartung, M.; Groß, A.; Kirsten, T.; Rahm, E.
An Evolution-based Approach for Assessing Ontology Mappings - A Case Study in the Life Sciences
Proc. of 13. GI-Fachtagung für Datenbanksysteme in Business, Technologie und Web (BTW), 2009
2009-03
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Groß, A.; Hartung, M.; Kirsten, T.; Rahm, E.
Evolution-based analysis of functional protein annotation
Poster at 7th Leipzig Research Festival for Life Sciences 2008
2008-12