Research assistant

Interdisciplinary Center for Bioinformatics
Working group 1: Data management and integration in the bioinformatics

Contacts
Postal address: Härtelstraße 16-18, 04107 Leipzig, Germany
Phone: 03 41 / 97 16 68 2
e-mail: tkirsten@informatik.uni-leipzig.de
homepage: http://www.informatik.uni-leipzig.de/~tkirsten

Selected Publications

Kirsten, T.; Hartung, M.; Groß, A.; Rahm, E. Efficient Management of Biomedical Ontology Versions LNCS 5872, pp.574-583, 4th Intl. Workshop on Ontology Content (Part of the OTM Conferences & Workshops) 2009-11

Hartung, M.; Kirsten, T.; Groß, A.; Rahm, E. OnEX: Exploring changes in life science ontologies BMC Bioinformatics 2009, 10:250 2009-08

Groß, A.; Hartung, M.; Kirsten, T.; Rahm, E. Estimating the Quality of Ontology-based Annotations by Considering Evolutionary Changes Proc. of 6th Int. Workshop on Data Integration in the Life Sciences (DILS), Springer LNCS 5647, 2009 2009-07

Hartung, M.; Kirsten, T.; Groß, A.; Rahm, E. Exploring changes in life science ontologies with OnEX Poster at 7th Leipzig Research Festival for Life Sciences 2008 and 6th Intl. Workshop on Data Integration in the Life Sciences (DILS) 2009 2009-07

Thor, A.; Hartung, M.; Groß, A.; Kirsten, T.; Rahm, E. An Evolution-based Approach for Assessing Ontology Mappings - A Case Study in the Life Sciences Proc. of 13. GI-Fachtagung für Datenbanksysteme in Business, Technologie und Web (BTW), 2009 2009-03

Groß, A.; Hartung, M.; Kirsten, T.; Rahm, E. Evolution-based analysis of functional protein annotation 7th Leipzig Research Festival for Life Sciences 2008 2008-12

Hartung, M.; Kirsten, T.; Rahm, E. Analyzing the Evolution of Life Science Ontologies and Mappings Proc. of 5th Int. Workshop on Data Integration in the Life Sciences (DILS), Springer LNCS 5109, 2008 2008-06 [10 citations]

Kirsten, T.; Thor, A.; Rahm, E. Instance-based matching of large life science ontologies Proc. DILS 2007, LNCS 2007-06 [14 citations]

Thor, A.; Kirsten, T.; Rahm, E. Instance-based matching of hierarchical ontologies Proc. of 12. GI-Fachtagung für Datenbanksysteme in Business, Technologie und Web 2007-03 [8 citations]

Rahm, Erhard; Kirsten, Toralf; Lange, Jörg The GeWare data warehouse platform for the analysis of molecular-biological and clinical data Journal of Integrative Bioinformatics, 4(1):47, 2007 2007-01-20 [11 citations]

Kirsten, Toralf; Rahm, Erhard BioFuice: Mapping-based data integration in bioinformatics Proc. of 3rd Int. Workshop on Data Integration in the Life Sciences (DILS), Springer LNCS 4075, 2006 2006-07 [12 citations]

Kirsten, Toralf; Lange, Jörg; Rahm, Erhard An integrated platform for analyzing molecular-biological data within clinical studies EDBT-Workshop Information Integration in Healthcare Applications, Springer LNCS 4254, 2006 2006-03

Kirsten, T.; Rahm, E. BioFuice: A decentralized Approach to integrate molecular-biological Data Proc 4th Research Festival for Life Sciences, Leipzig, Dec. 2005 2005-12

Lange, J.; Kirsten, T.; Rahm, E.; Berger, H.; Löffler, M. An integrated platform for analyzing clinical and molecular-biological data in collaborative research projects Proc 4th Research Festival for Life Sciences, Leipzig, Dec. 2005 2005-12

Kirsten, T.; Körner, C.; Do, H.H.; Rahm, E. Hybrid Integration of Molecular-biological Annotation Data Proc. 2nd International Workshop on Data Integration in the Life Sciences (DILS), Springer LNCS 3615, 2005 2005-07 [10 citations]

Rahm, E.; Thor, A.; Aumueller, D.; Do, H.H.; Golovin, N.; Kirsten, T. iFuice - Information Fusion utilizing Instance Correspondences and Peer Mappings 8th International Workshop on the Web and Databases (WebDB) 2005-06 [18 citations]

Körner, C.; Kirsten, T.; Do, H.H., Rahm, E. Hybride Integration von molekularbiologischen Annotationsdaten 11th Conf. of Database Systems for Business, Technology and Web (BTW) 2005-03

Kirsten, T.; Do, H.H.; Rahm, E. A Data Warehouse for Multidimensional Gene Expression Analysis Technical Report, IZBI Working Paper Nr. 1 2004-05 [12 citations]

Kirsten, T.; Do, H.H.; Rahm, E. Data Integration for Genomic Research Proc. 3rd Biotech Day, Univ. Leipzig, May 2004 2004-03

Kirsten, T.; Do, H.H.; Rahm, E. A Multidimensional Data Warehouse for Gene Expression Analysis Proc. German Conference on Bioinformatics (GCB) 2003, Munich, October 2003 2003-10

Kirsten, T.; Do, H.H.; Rahm, E. Data Integration for Analyzing Gene Expression Data Proc. 6th Meeting of Microarray Gene Expression Data Society (MGED), Aix-en-Provence (France), September 2003 2003-09

Kirsten, T.; Do, H.H.; Rahm, E. Data Integration for Analyzing Gene Expression Data Proc. 2nd Biotech Day, Univ. Leipzig, May 2003. pp. 88-89 2003-05

Rahm, E.; Do, H.H.; Kirsten, T. Data Integration for Analyzing Gene Expression Data - Selected Projects Data Integration for Analyzing Gene Expression Data. Bonn, May 2003. 2003-05

Do, H.H.; Kirsten, T. ; Rahm, E. Comparative Evaluation of Microarray-based Gene Expression Databases Proc. 10. Fachtagung Datenbanksysteme für Business, Technologie und Web (BTW 2003), GI, Lecture Notes in Informatics (LNI), Feb. 2003 2003-02 [12 citations]

Kirsten, T.; Do, H.H.; Sosna, D.; Rahm, E., Krohn, K.; Eszlinger, M.; Paschke, R. Gene Expression Warehousing in Leipzig Poster for the Workshop on Databases and Data Integration in Genome Research, Berlin, February 2002 2002-02

Kirsten, T.; Do, H.H.; Rahm, E.; Krohn, K. Gene Expression Warehousing in Leipzig. Poster/Abstract, Proc. Biotech Day, Univ. Leipzig, May 2002, pp. 152-153. 2002